IL_7BOE_023

3D structure

PDB id

7BOE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOE_023 not in the Motif Atlas

Geometric match to IL_5J7L_023

Geometric discrepancy: 0.0825

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

7BOE|1|A|G|450
7BOE|1|A|A|451
7BOE|1|A|A|452
7BOE|1|A|G|453
7BOE|1|A|G|454
7BOE|1|A|G|455
*
7BOE|1|A|C|477
7BOE|1|A|A|478
7BOE|1|A|U|479
7BOE|1|A|U|480
7BOE|1|A|G|481
7BOE|1|A|A|482
7BOE|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16