IL_7BOE_059

3D structure

PDB id

7BOE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GU(5MC)AC*GAAGUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 5MC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOE_059 not in the Motif Atlas

Homologous match to IL_5J7L_060

Geometric discrepancy: 0.5168

The information below is about IL_5J7L_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BOE|1|A|G|1405
7BOE|1|A|U|1406
7BOE|1|A|5MC|1407
7BOE|1|A|A|1408
7BOE|1|A|C|1409
*
7BOE|1|A|G|1491
7BOE|1|A|A|1492
7BOE|1|A|A|1493
7BOE|1|A|G|1494
7BOE|1|A|U|1495
7BOE|1|A|C|1496

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12