IL_7BOE_060

3D structure

PDB id

7BOE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUGG*CUGGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7BOE_060 not in the Motif Atlas

Geometric match to IL_4V88_422

Geometric discrepancy: 0.3947

The information below is about IL_4V88_422

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

7BOE|1|A|C|1412
7BOE|1|A|A|1413
7BOE|1|A|U|1414
7BOE|1|A|G|1415
7BOE|1|A|G|1416
*
7BOE|1|A|C|1484
7BOE|1|A|U|1485
7BOE|1|A|G|1486
7BOE|1|A|G|1487
7BOE|1|A|G|1488

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12