3D structure

PDB id
7BOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
GUUGC*GAACUC
Length
11 nucleotides
Bulged bases
7BOH|1|A|U|1126
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7BOH_051 not in the Motif Atlas
Homologous match to IL_5J7L_051
Geometric discrepancy: 0.1128
The information below is about IL_5J7L_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_06691.1
Basepair signature
cWW-cWS-L-R-L-R-cWW-L
Number of instances in this motif group
2

Unit IDs

7BOH|1|A|G|1124
7BOH|1|A|U|1125
7BOH|1|A|U|1126
7BOH|1|A|G|1127
7BOH|1|A|C|1128
*
7BOH|1|A|G|1144
7BOH|1|A|A|1145
7BOH|1|A|A|1146
7BOH|1|A|C|1147
7BOH|1|A|U|1148
7BOH|1|A|C|1149

Current chains

Chain A
RNA (1527-MER)

Nearby chains

Chain I
30S ribosomal protein S9
Chain J
30S ribosomal protein S10

Coloring options:


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