IL_7BT6_084

3D structure

PDB id

7BT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

UUGA*UACA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BT6|1|1|U|2718
7BT6|1|1|U|2719
7BT6|1|1|G|2720
7BT6|1|1|A|2721
*
7BT6|1|1|U|2735
7BT6|1|1|A|2736
7BT6|1|1|C|2737
7BT6|1|1|A|2738

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain m

Nucleolar GTP-binding protein 2

Chain r

Ribosome biogenesis protein NSA2

Chain v

Ribosome biogenesis protein RPF2

Chain w

Regulator of ribosome biosynthesis

Chain x

Ribosome assembly protein 4