IL_7BT6_138

3D structure

PDB id

7BT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

GAUAU*AUGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BT6|1|1|G|1618
7BT6|1|1|A|1619
7BT6|1|1|U|1620
7BT6|1|1|A|1621
7BT6|1|1|U|1622
*
7BT6|1|1|A|1823
7BT6|1|1|U|1824
7BT6|1|1|G|1825
7BT6|1|1|C|1826

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains

Chain 2

5.8S ribosomal RNA; 5.8S rRNA

Chain g

60S ribosomal protein L34-A

Chain k

60S ribosomal protein L38