IL_7BT6_141

3D structure

PDB id

7BT6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

UCUGAAUGUCAAAGU*AACCAAGCGCGG

Length

27 nucleotides

Bulged bases

7BT6|1|1|U|2205, 7BT6|1|1|A|2208, 7BT6|1|1|U|2209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BT6|1|1|U|2203
7BT6|1|1|C|2204
7BT6|1|1|U|2205
7BT6|1|1|G|2206
7BT6|1|1|A|2207
7BT6|1|1|A|2208
7BT6|1|1|U|2209
7BT6|1|1|G|2210
7BT6|1|1|U|2211
7BT6|1|1|C|2212
7BT6|1|1|A|2213
7BT6|1|1|A|2214
7BT6|1|1|A|2215
7BT6|1|1|G|2216
7BT6|1|1|U|2217
*
7BT6|1|1|A|2228
7BT6|1|1|A|2229
7BT6|1|1|C|2230
7BT6|1|1|C|2231
7BT6|1|1|A|2232
7BT6|1|1|A|2233
7BT6|1|1|G|2234
7BT6|1|1|C|2235
7BT6|1|1|G|2236
7BT6|1|1|C|2237
7BT6|1|1|G|2238
7BT6|1|1|G|2239

Current chains

Chain 1

RDN25-1 rRNA

Nearby chains