IL_7CPJ_023
3D structure
- PDB id
- 7CPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ycbZ-stalled 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UC*GUUA
- Length
- 6 nucleotides
- Bulged bases
- 7CPJ|1|A|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7CPJ_023 not in the Motif Atlas
- Homologous match to IL_5J7L_268
- Geometric discrepancy: 0.1128
- The information below is about IL_5J7L_268
- Detailed Annotation
- Stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_56987.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7CPJ|1|A|U|847
7CPJ|1|A|C|848
*
7CPJ|1|A|G|930
7CPJ|1|A|U|931
7CPJ|1|A|U|932
7CPJ|1|A|A|933
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Z
- 50S ribosomal protein L30
Coloring options: