IL_7CPU_021

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AUUCAAC*GCGCACUU

Length

15 nucleotides

Bulged bases

7CPU|1|L5|C|695

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|A|465
7CPU|1|L5|U|466
7CPU|1|L5|U|467
7CPU|1|L5|C|468
7CPU|1|L5|A|469
7CPU|1|L5|A|470
7CPU|1|L5|C|471
*
7CPU|1|L5|G|690
7CPU|1|L5|C|691
7CPU|1|L5|G|692
7CPU|1|L5|C|693
7CPU|1|L5|A|694
7CPU|1|L5|C|695
7CPU|1|L5|U|696
7CPU|1|L5|U|697

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28