IL_7CPU_057

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CUCGCCG*CG

Length

9 nucleotides

Bulged bases

7CPU|1|L5|C|1512

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|C|1508
7CPU|1|L5|U|1509
7CPU|1|L5|C|1510
7CPU|1|L5|G|1511
7CPU|1|L5|C|1512
7CPU|1|L5|C|1523
7CPU|1|L5|G|1524
*
7CPU|1|L5|C|1644
7CPU|1|L5|G|1645

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain Lb

60S ribosomal protein L29