IL_7CPU_104

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GAAUG*CGC

Length

8 nucleotides

Bulged bases

7CPU|1|L5|U|3370

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|G|3367
7CPU|1|L5|A|3368
7CPU|1|L5|A|3369
7CPU|1|L5|U|3370
7CPU|1|L5|G|3371
*
7CPU|1|L5|C|3396
7CPU|1|L5|G|3397
7CPU|1|L5|C|3398

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain S2

Small subunit ribosomal RNA; SSU rRNA

Chain S6

Transfer RNA; tRNA