IL_7CPU_114
3D structure
- PDB id
- 7CPU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse kidney
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 7CPU|1|L5|C|3754, 7CPU|1|L5|G|3766, 7CPU|1|L5|C|3767, 7CPU|1|L5|U|3768, 7CPU|1|L5|U|3769, 7CPU|1|L5|G|3772
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPU|1|L5|G|3742
7CPU|1|L5|G|3743
7CPU|1|L5|G|3744
7CPU|1|L5|G|3745
7CPU|1|L5|G|3746
7CPU|1|L5|C|3747
7CPU|1|L5|G|3748
7CPU|1|L5|A|3749
7CPU|1|L5|G|3750
7CPU|1|L5|C|3751
7CPU|1|L5|C|3752
7CPU|1|L5|C|3753
7CPU|1|L5|C|3754
7CPU|1|L5|G|3755
7CPU|1|L5|A|3756
7CPU|1|L5|G|3757
7CPU|1|L5|G|3758
7CPU|1|L5|G|3759
7CPU|1|L5|G|3760
7CPU|1|L5|C|3761
7CPU|1|L5|U|3762
7CPU|1|L5|C|3763
7CPU|1|L5|U|3764
7CPU|1|L5|C|3765
7CPU|1|L5|G|3766
7CPU|1|L5|C|3767
7CPU|1|L5|U|3768
7CPU|1|L5|U|3769
7CPU|1|L5|C|3770
7CPU|1|L5|U|3771
7CPU|1|L5|G|3772
7CPU|1|L5|G|3773
7CPU|1|L5|C|3774
7CPU|1|L5|G|3775
7CPU|1|L5|C|3776
7CPU|1|L5|C|3777
7CPU|1|L5|A|3778
7CPU|1|L5|A|3779
7CPU|1|L5|G|3780
*
7CPU|1|L5|C|3808
7CPU|1|L5|G|3809
7CPU|1|L5|A|3810
7CPU|1|L5|C|3811
Current chains
- Chain L5
- Mus musculus 28S ribosomal RNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain LG
- 60S ribosomal protein L7a
- Chain LX
- 60S ribosomal protein L23a
- Chain LZ
- 60S ribosomal protein L27
- Chain Lc
- 60S ribosomal protein L30
- Chain Lg
- 60S ribosomal protein L34
- Chain Lp
- 60S ribosomal protein L37a
- Chain SB
- 40S ribosomal protein S3a
Coloring options: