IL_7CPU_148

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

GGUGCGG*CCGCCC

Length

13 nucleotides

Bulged bases

7CPU|1|L5|U|4546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|L5|G|4544
7CPU|1|L5|G|4545
7CPU|1|L5|U|4546
7CPU|1|L5|G|4547
7CPU|1|L5|C|4548
7CPU|1|L5|G|4549
7CPU|1|L5|G|4550
*
7CPU|1|L5|C|4563
7CPU|1|L5|C|4564
7CPU|1|L5|G|4565
7CPU|1|L5|C|4566
7CPU|1|L5|C|4567
7CPU|1|L5|C|4568

Current chains

Chain L5

Mus musculus 28S ribosomal RNA

Nearby chains

Chain LM

60S ribosomal protein L14