IL_7CPU_195
3D structure
- PDB id
- 7CPU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse kidney
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 7CPU|1|S2|A|669
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7CPU_195 not in the Motif Atlas
- Geometric match to IL_5J7L_026
- Geometric discrepancy: 0.1179
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
7CPU|1|S2|G|666
7CPU|1|S2|U|667
7CPU|1|S2|U|668
7CPU|1|S2|A|669
7CPU|1|S2|A|670
7CPU|1|S2|A|671
7CPU|1|S2|A|672
*
7CPU|1|S2|U|1162
7CPU|1|S2|C|1163
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SX
- 40S ribosomal protein S23
- Chain Sa
- 40S ribosomal protein S26
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