IL_7CPU_247

3D structure

PDB id

7CPU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 80S ribosome from mouse kidney

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CCCCGCC*GCGGAGCG

Length

15 nucleotides

Bulged bases

7CPU|1|S2|C|1754

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7CPU|1|S2|C|1751
7CPU|1|S2|C|1752
7CPU|1|S2|C|1753
7CPU|1|S2|C|1754
7CPU|1|S2|G|1755
7CPU|1|S2|C|1756
7CPU|1|S2|C|1757
*
7CPU|1|S2|G|1778
7CPU|1|S2|C|1779
7CPU|1|S2|G|1780
7CPU|1|S2|G|1781
7CPU|1|S2|A|1782
7CPU|1|S2|G|1783
7CPU|1|S2|C|1784
7CPU|1|S2|G|1785

Current chains

Chain S2

Mus musculus 18S ribosomal RNA

Nearby chains

Chain SG

40S ribosomal protein S6