IL_7CPU_269
3D structure
- PDB id
- 7CPU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse kidney
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 7CPU|1|S2|U|1586, 7CPU|1|S2|G|1588
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7CPU|1|S2|G|1542
7CPU|1|S2|C|1543
7CPU|1|S2|U|1544
7CPU|1|S2|C|1545
7CPU|1|S2|A|1546
7CPU|1|S2|G|1547
7CPU|1|S2|C|1548
7CPU|1|S2|G|1549
7CPU|1|S2|U|1550
7CPU|1|S2|G|1551
*
7CPU|1|S2|C|1583
7CPU|1|S2|C|1584
7CPU|1|S2|G|1585
7CPU|1|S2|U|1586
7CPU|1|S2|U|1587
7CPU|1|S2|G|1588
7CPU|1|S2|A|1589
7CPU|1|S2|A|1590
7CPU|1|S2|C|1591
7CPU|1|S2|C|1592
7CPU|1|S2|C|1593
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S ribosomal protein S3
- Chain SF
- 40S ribosomal protein S5
- Chain SQ
- 40S ribosomal protein S16
- Chain ST
- 40S ribosomal protein S19
- Chain SU
- 40S ribosomal protein S20
- Chain SZ
- 40S ribosomal protein S25
- Chain Sd
- 40S ribosomal protein S29
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