IL_7CPV_164
3D structure
- PDB id
- 7CPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 80S ribosome from mouse testis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- GAUUAAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 7CPV|1|S2|A|46
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7CPV_164 not in the Motif Atlas
- Homologous match to IL_4V88_387
- Geometric discrepancy: 0.1407
- The information below is about IL_4V88_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77761.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7CPV|1|S2|G|41
7CPV|1|S2|A|42
7CPV|1|S2|U|43
7CPV|1|S2|U|44
7CPV|1|S2|A|45
7CPV|1|S2|A|46
7CPV|1|S2|G|47
*
7CPV|1|S2|C|480
7CPV|1|S2|G|481
7CPV|1|S2|C|482
Current chains
- Chain S2
- Mus musculus 18S ribosomal RNA
Nearby chains
- Chain SX
- 40S ribosomal protein S23
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