IL_7D5S_059

3D structure

PDB id

7D5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CGAUUGA*UUUAGAG

Length

14 nucleotides

Bulged bases

7D5S|1|SA|U|1657

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D5S|1|SA|C|1653
7D5S|1|SA|G|1654
7D5S|1|SA|A|1655
7D5S|1|SA|U|1656
7D5S|1|SA|U|1657
7D5S|1|SA|G|1658
7D5S|1|SA|A|1659
*
7D5S|1|SA|U|1741
7D5S|1|SA|U|1742
7D5S|1|SA|U|1743
7D5S|1|SA|A|1744
7D5S|1|SA|G|1745
7D5S|1|SA|A|1746
7D5S|1|SA|G|1747

Current chains

Chain SA

18S rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12