IL_7D5S_075

3D structure

PDB id

7D5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CUCAGGAU*AGAAUUUG

Length

16 nucleotides

Bulged bases

7D5S|1|SA|U|1724

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D5S|1|SA|C|1675
7D5S|1|SA|U|1676
7D5S|1|SA|C|1677
7D5S|1|SA|A|1678
7D5S|1|SA|G|1679
7D5S|1|SA|G|1680
7D5S|1|SA|A|1681
7D5S|1|SA|U|1682
*
7D5S|1|SA|A|1719
7D5S|1|SA|G|1720
7D5S|1|SA|A|1721
7D5S|1|SA|A|1722
7D5S|1|SA|U|1723
7D5S|1|SA|U|1724
7D5S|1|SA|U|1725
7D5S|1|SA|G|1726

Current chains

Chain SA

18S rRNA

Nearby chains

Chain B3

U3 small nucleolar RNA-associated protein 13