IL_7D5T_008

3D structure

PDB id

7D5T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CCGUUGCA*UUUUAUGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D5T|1|3A|C|200
7D5T|1|3A|C|201
7D5T|1|3A|G|202
7D5T|1|3A|U|203
7D5T|1|3A|U|204
7D5T|1|3A|G|205
7D5T|1|3A|C|206
7D5T|1|3A|A|207
*
7D5T|1|3A|U|242
7D5T|1|3A|U|243
7D5T|1|3A|U|244
7D5T|1|3A|U|245
7D5T|1|3A|A|246
7D5T|1|3A|U|247
7D5T|1|3A|G|248
7D5T|1|3A|G|249

Current chains

Chain 3A

U3 snoRNA

Nearby chains

Chain 3F

Ribosomal RNA-processing protein 9