IL_7D63_060

3D structure

PDB id

7D63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)

Experimental method

ELECTRON MICROSCOPY

Resolution

12.3 Å

Loop

Sequence

CGAUUGAA*UUUAGAG

Length

15 nucleotides

Bulged bases

7D63|1|SA|U|1657

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D63|1|SA|C|1653
7D63|1|SA|G|1654
7D63|1|SA|A|1655
7D63|1|SA|U|1656
7D63|1|SA|U|1657
7D63|1|SA|G|1658
7D63|1|SA|A|1659
7D63|1|SA|A|1660
*
7D63|1|SA|U|1741
7D63|1|SA|U|1742
7D63|1|SA|U|1743
7D63|1|SA|A|1744
7D63|1|SA|G|1745
7D63|1|SA|A|1746
7D63|1|SA|G|1747

Current chains

Chain SA

18S rRNA

Nearby chains

Chain B2

U3 small nucleolar RNA-associated protein 12

Chain B3

U3 small nucleolar RNA-associated protein 13