IL_7D63_067
3D structure
- PDB id
- 7D63 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 90S preribosome with inactive Utp24 (state C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.3 Å
Loop
- Sequence
- GAGUCCCAUAACCU*AUGGCAGUC
- Length
- 23 nucleotides
- Bulged bases
- 7D63|1|3A|G|87, 7D63|1|3A|U|88, 7D63|1|3A|C|89, 7D63|1|3A|C|90, 7D63|1|3A|C|91, 7D63|1|3A|U|93, 7D63|1|3A|U|318, 7D63|1|3A|U|324
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D63|1|3A|G|85
7D63|1|3A|A|86
7D63|1|3A|G|87
7D63|1|3A|U|88
7D63|1|3A|C|89
7D63|1|3A|C|90
7D63|1|3A|C|91
7D63|1|3A|A|92
7D63|1|3A|U|93
7D63|1|3A|A|94
7D63|1|3A|A|95
7D63|1|3A|C|96
7D63|1|3A|C|97
7D63|1|3A|U|98
*
7D63|1|3A|A|317
7D63|1|3A|U|318
7D63|1|3A|G|319
7D63|1|3A|G|320
7D63|1|3A|C|321
7D63|1|3A|A|322
7D63|1|3A|G|323
7D63|1|3A|U|324
7D63|1|3A|C|325
Current chains
- Chain 3A
- U3 snoRNA
Nearby chains
- Chain 3B
- rRNA 2'-O-methyltransferase fibrillarin
- Chain 3C
- rRNA 2'-O-methyltransferase fibrillarin
- Chain 3E
- Nucleolar protein 58
- Chain 3G
- 13 kDa ribonucleoprotein-associated protein
- Chain 5D
- U3 small nucleolar RNA-associated protein 11
- Chain 5J
- rRNA-processing protein FCF2
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