IL_7D6Z_124
3D structure
- PDB id
- 7D6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7D6Z|1|f|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D6Z_124 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1259
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7D6Z|1|f|G|147
7D6Z|1|f|G|148
7D6Z|1|f|A|149
7D6Z|1|f|U|150
7D6Z|1|f|A|151
7D6Z|1|f|A|152
7D6Z|1|f|C|153
*
7D6Z|1|f|G|168
7D6Z|1|f|C|169
7D6Z|1|f|U|170
7D6Z|1|f|A|171
7D6Z|1|f|A|172
7D6Z|1|f|U|173
7D6Z|1|f|A|174
7D6Z|1|f|C|175
Current chains
- Chain f
- 16S ribosomal rRNA
Nearby chains
- Chain 0
- 30S ribosomal protein S20
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