IL_7D80_057

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CCGUAAC*GGAGAAGG

Length

15 nucleotides

Bulged bases

7D80|1|A|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|C|1685
7D80|1|A|C|1686
7D80|1|A|G|1687
7D80|1|A|U|1688
7D80|1|A|A|1689
7D80|1|A|A|1690
7D80|1|A|C|1691
*
7D80|1|A|G|1696
7D80|1|A|G|1697
7D80|1|A|A|1698
7D80|1|A|G|1699
7D80|1|A|A|1700
7D80|1|A|A|1701
7D80|1|A|G|1702
7D80|1|A|G|1703

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

Small subunit ribosomal RNA; SSU rRNA

Chain b

50S ribosomal protein L2