IL_7D80_074

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UGAUGUGUAGGAUAGGU*ACCCUUUA

Length

25 nucleotides

Bulged bases

7D80|1|A|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|U|2106
7D80|1|A|G|2107
7D80|1|A|A|2108
7D80|1|A|U|2109
7D80|1|A|G|2110
7D80|1|A|U|2111
7D80|1|A|G|2112
7D80|1|A|U|2113
7D80|1|A|A|2114
7D80|1|A|G|2115
7D80|1|A|G|2116
7D80|1|A|A|2117
7D80|1|A|U|2118
7D80|1|A|A|2119
7D80|1|A|G|2120
7D80|1|A|G|2121
7D80|1|A|U|2122
*
7D80|1|A|A|2176
7D80|1|A|C|2177
7D80|1|A|C|2178
7D80|1|A|C|2179
7D80|1|A|U|2180
7D80|1|A|U|2181
7D80|1|A|U|2182
7D80|1|A|A|2183

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

Transfer RNA; tRNA