IL_7D80_096
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AUUGA*UAAU
- Length
- 9 nucleotides
- Bulged bases
- 7D80|1|B|G|31
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_096 not in the Motif Atlas
- Geometric match to IL_4WF9_110
- Geometric discrepancy: 0.352
- The information below is about IL_4WF9_110
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7D80|1|B|A|28
7D80|1|B|U|29
7D80|1|B|U|30
7D80|1|B|G|31
7D80|1|B|A|32
*
7D80|1|B|U|552
7D80|1|B|A|553
7D80|1|B|A|554
7D80|1|B|U|555
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S4
- Chain M
- 30S ribosomal protein S12
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