IL_7D80_108

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGGGAG*UACCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|B|G|444
7D80|1|B|G|445
7D80|1|B|G|446
7D80|1|B|G|447
7D80|1|B|A|448
7D80|1|B|G|449
*
7D80|1|B|U|486
7D80|1|B|A|487
7D80|1|B|C|488
7D80|1|B|C|489
7D80|1|B|C|490

Current chains

Chain B

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S4

Chain Q

30S ribosomal protein S16