IL_7D80_118

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CGUAGAGG*CUGGACG

Length

15 nucleotides

Bulged bases

7D80|1|B|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|B|C|660
7D80|1|B|G|661
7D80|1|B|U|662
7D80|1|B|A|663
7D80|1|B|G|664
7D80|1|B|A|665
7D80|1|B|G|666
7D80|1|B|G|667
*
7D80|1|B|C|739
7D80|1|B|U|740
7D80|1|B|G|741
7D80|1|B|G|742
7D80|1|B|A|743
7D80|1|B|C|744
7D80|1|B|G|745

Current chains

Chain B

16S ribosomal RNA

Nearby chains

Chain G

30S ribosomal protein S6, fully modified isoform

Chain P

30S ribosomal protein S15

Chain S

30S ribosomal protein S18

Chain V

30S ribosomal protein S21