3D structure

PDB id
7D80 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
Experimental method
ELECTRON MICROSCOPY
Resolution
4.1 Å

Loop

Sequence
GUGUAGC*GCGUAGAGAU
Length
17 nucleotides
Bulged bases
7D80|1|B|A|702
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7D80|1|B|G|683
7D80|1|B|U|684
7D80|1|B|G|685
7D80|1|B|U|686
7D80|1|B|A|687
7D80|1|B|G|688
7D80|1|B|C|689
*
7D80|1|B|G|698
7D80|1|B|C|699
7D80|1|B|G|700
7D80|1|B|U|701
7D80|1|B|A|702
7D80|1|B|G|703
7D80|1|B|A|704
7D80|1|B|G|705
7D80|1|B|A|706
7D80|1|B|U|707

Current chains

Chain B
16S ribosomal RNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain L
30S ribosomal protein S11

Coloring options:

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