IL_7D80_129

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

GGAAG*UGUGCCUUCGGGAACC

Length

21 nucleotides

Bulged bases

7D80|1|B|U|1030

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|B|G|1002
7D80|1|B|G|1003
7D80|1|B|A|1004
7D80|1|B|A|1005
7D80|1|B|G|1006
*
7D80|1|B|U|1023
7D80|1|B|G|1024
7D80|1|B|U|1025
7D80|1|B|G|1026
7D80|1|B|C|1027
7D80|1|B|C|1028
7D80|1|B|U|1029
7D80|1|B|U|1030
7D80|1|B|C|1031
7D80|1|B|G|1032
7D80|1|B|G|1033
7D80|1|B|G|1034
7D80|1|B|A|1035
7D80|1|B|A|1036
7D80|1|B|C|1037
7D80|1|B|C|1038

Current chains

Chain B

16S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S14