IL_7D80_153
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CCU*AGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_153 not in the Motif Atlas
- Homologous match to IL_4WF9_114
- Geometric discrepancy: 0.1616
- The information below is about IL_4WF9_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10810.1
- Basepair signature
- cWW-L-cWS-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
7D80|1|a|C|30
7D80|1|a|C|31
7D80|1|a|U|32
*
7D80|1|a|A|50
7D80|1|a|G|51
7D80|1|a|A|52
7D80|1|a|A|53
7D80|1|a|G|54
Current chains
- Chain a
- 5S ribosomal RNA
Nearby chains
- Chain e
- 50S ribosomal protein L5
- Chain n
- 50S ribosomal protein L18
Coloring options: