IL_7D80_186
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UGGGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUACCA
- Length
- 37 nucleotides
- Bulged bases
- 7D80|1|A|G|2124, 7D80|1|A|G|2125, 7D80|1|A|C|2129, 7D80|1|A|U|2132, 7D80|1|A|C|2164, 7D80|1|A|A|2171
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|U|2122
7D80|1|A|G|2123
7D80|1|A|G|2124
7D80|1|A|G|2125
7D80|1|A|A|2126
7D80|1|A|G|2127
7D80|1|A|G|2128
7D80|1|A|C|2129
7D80|1|A|U|2130
7D80|1|A|U|2131
7D80|1|A|U|2132
7D80|1|A|G|2133
7D80|1|A|A|2134
7D80|1|A|A|2135
7D80|1|A|G|2136
*
7D80|1|A|U|2155
7D80|1|A|G|2156
7D80|1|A|G|2157
7D80|1|A|A|2158
7D80|1|A|G|2159
7D80|1|A|C|2160
7D80|1|A|C|2161
7D80|1|A|G|2162
7D80|1|A|A|2163
7D80|1|A|C|2164
7D80|1|A|C|2165
7D80|1|A|U|2166
7D80|1|A|U|2167
7D80|1|A|G|2168
7D80|1|A|A|2169
7D80|1|A|A|2170
7D80|1|A|A|2171
7D80|1|A|U|2172
7D80|1|A|A|2173
7D80|1|A|C|2174
7D80|1|A|C|2175
7D80|1|A|A|2176
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain X
- Transfer RNA; tRNA
Coloring options: