IL_7D80_188

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CUGCGAG*CGAGCAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|C|2347
7D80|1|A|U|2348
7D80|1|A|G|2349
7D80|1|A|C|2350
7D80|1|A|G|2351
7D80|1|A|A|2352
7D80|1|A|G|2353
*
7D80|1|A|C|2364
7D80|1|A|G|2365
7D80|1|A|A|2366
7D80|1|A|G|2367
7D80|1|A|C|2368
7D80|1|A|A|2369
7D80|1|A|G|2370

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L35

Chain n

50S ribosomal protein L18

Chain u

50S ribosomal protein L27

Chain z

50S ribosomal protein L33