3D structure

PDB id
7D80 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
Experimental method
ELECTRON MICROSCOPY
Resolution
4.1 Å

Loop

Sequence
CGCCCAAG*CGACGGCG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7D80|1|A|C|2463
7D80|1|A|G|2464
7D80|1|A|C|2465
7D80|1|A|C|2466
7D80|1|A|C|2467
7D80|1|A|A|2468
7D80|1|A|A|2469
7D80|1|A|G|2470
*
7D80|1|A|C|2480
7D80|1|A|G|2481
7D80|1|A|A|2482
7D80|1|A|C|2483
7D80|1|A|G|2484
7D80|1|A|G|2485
7D80|1|A|C|2486
7D80|1|A|G|2487

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 2
50S ribosomal protein L36
Chain Z
Transfer RNA; tRNA
Chain a
5S ribosomal RNA; 5S rRNA
Chain l
50S ribosomal protein L16

Coloring options:

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