IL_7D80_196

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UCACUGGU*GCUAAA

Length

14 nucleotides

Bulged bases

7D80|1|A|A|2726

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|U|2680
7D80|1|A|C|2681
7D80|1|A|A|2682
7D80|1|A|C|2683
7D80|1|A|U|2684
7D80|1|A|G|2685
7D80|1|A|G|2686
7D80|1|A|U|2687
*
7D80|1|A|G|2722
7D80|1|A|C|2723
7D80|1|A|U|2724
7D80|1|A|A|2725
7D80|1|A|A|2726
7D80|1|A|A|2727

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L3

Chain j

50S ribosomal protein L14

Chain m

50S ribosomal protein L17

Chain o

50S ribosomal protein L19