IL_7D80_201
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GGGGGC*GCCUU
- Length
- 11 nucleotides
- Bulged bases
- 7D80|1|B|G|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7D80_201 not in the Motif Atlas
- Geometric match to IL_7VYX_004
- Geometric discrepancy: 0.289
- The information below is about IL_7VYX_004
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7D80|1|B|G|925
7D80|1|B|G|926
7D80|1|B|G|927
7D80|1|B|G|928
7D80|1|B|G|929
7D80|1|B|C|930
*
7D80|1|B|G|1387
7D80|1|B|C|1388
7D80|1|B|C|1389
7D80|1|B|U|1390
7D80|1|B|U|1391
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain F
- 30S ribosomal protein S5
- Chain H
- 30S ribosomal protein S7
Coloring options: