IL_7D80_220

3D structure

PDB id

7D80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

AGAAG*CCUGCU

Length

11 nucleotides

Bulged bases

7D80|1|A|U|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7D80|1|A|A|1431
7D80|1|A|G|1432
7D80|1|A|A|1433
7D80|1|A|A|1434
7D80|1|A|G|1435
*
7D80|1|A|C|1557
7D80|1|A|C|1558
7D80|1|A|U|1559
7D80|1|A|G|1560
7D80|1|A|C|1561
7D80|1|A|U|1562

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L2