IL_7DUI_059
3D structure
- PDB id
- 7DUI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS bound
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.62 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 7DUI|1|A|G|1443, 7DUI|1|A|A|1446
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7DUI_059 not in the Motif Atlas
- Homologous match to IL_4LFB_064
- Geometric discrepancy: 0.1503
- The information below is about IL_4LFB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93811.1
- Basepair signature
- cWW-tHS-L-R-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7DUI|1|A|C|1440
7DUI|1|A|G|1441
7DUI|1|A|G|1442
7DUI|1|A|G|1443
7DUI|1|A|A|1446
7DUI|1|A|G|1447
*
7DUI|1|A|C|1459
7DUI|1|A|A|1460
7DUI|1|A|G|1461
Current chains
- Chain A
- 30S Ribosomal RNA rRNA
Nearby chains
- Chain T
- 30S ribosomal protein S20
Coloring options: