IL_7ECN_001
3D structure
- PDB id
- 7ECN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RNA duplex containing C-Ag-A base pairs
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 1.6 Å
Loop
- Sequence
- GCC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
7ECN|1|A|G|3
7ECN|1|A|C|4
7ECN|1|A|C|5
*
7ECN|1|B|G|8
7ECN|1|B|A|9
7ECN|1|B|C|10
Current chains
- Chain A
- RNA (5'-R(*GP*GP*GP*CP*CP*CP*GP*GP*AP*CP*CP*C)-3')
- Chain B
- RNA (5'-R(*GP*GP*GP*CP*CP*CP*GP*GP*AP*CP*CP*C)-3')
Nearby chains
No other chains within 10ÅColoring options: