IL_7F0D_126

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CAAAGACAAC*GUCAAG

Length

16 nucleotides

Bulged bases

7F0D|1|A|A|1174, 7F0D|1|A|A|1175, 7F0D|1|A|G|1176

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|C|1172
7F0D|1|A|A|1173
7F0D|1|A|A|1174
7F0D|1|A|A|1175
7F0D|1|A|G|1176
7F0D|1|A|A|1177
7F0D|1|A|C|1178
7F0D|1|A|A|1179
7F0D|1|A|A|1180
7F0D|1|A|C|1181
*
7F0D|1|A|G|1236
7F0D|1|A|U|1237
7F0D|1|A|C|1238
7F0D|1|A|A|1239
7F0D|1|A|A|1240
7F0D|1|A|G|1241

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6