IL_7F0D_134
3D structure
- PDB id
- 7F0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUCCC*GAACCC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7F0D_134 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.4567
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
7F0D|1|B|G|32
7F0D|1|B|G|33
7F0D|1|B|U|34
7F0D|1|B|C|35
7F0D|1|B|C|36
7F0D|1|B|C|37
*
7F0D|1|B|G|43
7F0D|1|B|A|44
7F0D|1|B|A|45
7F0D|1|B|C|46
7F0D|1|B|C|47
7F0D|1|B|C|48
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L31
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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