3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
CC*GCG
Length
5 nucleotides
Bulged bases
7F5S|1|L8|C|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7F5S_001 not in the Motif Atlas
Homologous match to IL_8C3A_002
Geometric discrepancy: 0.5648
The information below is about IL_8C3A_002
Detailed Annotation
Single bulged C
Broad Annotation
No text annotation
Motif group
IL_61258.13
Basepair signature
cWW-L-cWW
Number of instances in this motif group
40

Unit IDs

7F5S|1|L5|C|6
7F5S|1|L5|C|7
*
7F5S|1|L8|G|149
7F5S|1|L8|C|150
7F5S|1|L8|G|151

Current chains

Chain L5
28S rRNA
Chain L8
5.8S rRNA

Nearby chains

Chain LG
60S ribosomal protein L7a
Chain LN
60S ribosomal protein L15
Chain LX
60S ribosomal protein L23a

Coloring options:


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