IL_7F5S_101

3D structure

PDB id

7F5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

human delta-METTL18 60S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

7F5S|1|L5|U|2880

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7F5S_101 not in the Motif Atlas

Homologous match to IL_8C3A_084

Geometric discrepancy: 0.0971

The information below is about IL_8C3A_084

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65969.4

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7F5S|1|L5|C|2867
7F5S|1|L5|G|2868
7F5S|1|L5|U|2869
7F5S|1|L5|A|2870
7F5S|1|L5|A|2871
7F5S|1|L5|C|2872
*
7F5S|1|L5|G|2877
7F5S|1|L5|G|2878
7F5S|1|L5|A|2879
7F5S|1|L5|U|2880
7F5S|1|L5|A|2881
7F5S|1|L5|A|2882
7F5S|1|L5|G|2883

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Ln

60S ribosomal protein L41

Chain Lp

60S ribosomal protein L37a