IL_8C3A_084
3D structure
- PDB id
- 8C3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8C3A|1|1|U|1927
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8C3A|1|1|C|1914
8C3A|1|1|G|1915
8C3A|1|1|U|1916
8C3A|1|1|A|1917
8C3A|1|1|A|1918
8C3A|1|1|C|1919
*
8C3A|1|1|G|1924
8C3A|1|1|G|1925
8C3A|1|1|A|1926
8C3A|1|1|U|1927
8C3A|1|1|A|1928
8C3A|1|1|A|1929
8C3A|1|1|G|1930
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AO
- 60S ribosomal protein L41
- Chain AQ
- 60S ribosomal protein L43-A
- Chain B
- Small subunit ribosomal RNA; SSU rRNA
- Chain z
- 60S ribosomal protein L19-A
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