3D structure

PDB id
7F5S (explore in PDB, NAKB, or RNA 3D Hub)
Description
human delta-METTL18 60S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.72 Å

Loop

Sequence
CCAU*AGGCG
Length
9 nucleotides
Bulged bases
7F5S|1|L5|C|4720
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7F5S_150 not in the Motif Atlas
Geometric match to IL_6E7L_002
Geometric discrepancy: 0.3517
The information below is about IL_6E7L_002
Detailed Annotation
Double sheared
Broad Annotation
Double sheared
Motif group
IL_10484.1
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
2

Unit IDs

7F5S|1|L5|C|4582
7F5S|1|L5|C|4583
7F5S|1|L5|A|4584
7F5S|1|L5|U|4585
*
7F5S|1|L5|A|4717
7F5S|1|L5|G|4718
7F5S|1|L5|G|4719
7F5S|1|L5|C|4720
7F5S|1|L5|G|4721

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LB
60S ribosomal protein L3
Chain LO
60S ribosomal protein L13a

Coloring options:


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