IL_7F5S_150
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- CCAU*AGGCG
- Length
- 9 nucleotides
- Bulged bases
- 7F5S|1|L5|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7F5S_150 not in the Motif Atlas
- Geometric match to IL_6E7L_002
- Geometric discrepancy: 0.3517
- The information below is about IL_6E7L_002
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_69065.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7F5S|1|L5|C|4582
7F5S|1|L5|C|4583
7F5S|1|L5|A|4584
7F5S|1|L5|U|4585
*
7F5S|1|L5|A|4717
7F5S|1|L5|G|4718
7F5S|1|L5|G|4719
7F5S|1|L5|C|4720
7F5S|1|L5|G|4721
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LO
- 60S ribosomal protein L13a
Coloring options: