Motif IL_69065.1 Version IL_69065.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3PDR_003 | 3PDR | 0.0000 | 1 | Double sheared | X | M-box riboswitch (ykoK leader) | U | 28 | G | 29 | A | 30 | G | 31 | * | U | 153 | A | 154 | A | 156 | G | 157 | cWW | tSH | tHS | cWW |
| 2 | IL_6E7L_002 | 6E7L | 0.3397 | 0 | Double sheared | A | RNA (22-mer) | U | 10 | U | 11 | C | 12 | G | 13 | * | U | 10||||7_375 | U | 11||||7_375 | C | 12||||7_375 | G | 13||||7_375 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAG*UAAAG | 1 |
| UUCG*UUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*AAA | 1 |
| UC*UC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Double sheared (2)
- Basepair signature
- cWW-L-R-L-R-cWW
- Heat map statistics
- Min 0.34 | Avg 0.17 | Max 0.34
Coloring options: