IL_7JQB_012

3D structure

PDB id

7JQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

7JQB|1|A|C|142, 7JQB|1|A|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQB|1|A|G|130
7JQB|1|A|A|141
7JQB|1|A|C|142
7JQB|1|A|U|143
7JQB|1|A|U|144
*
7JQB|1|A|A|175
7JQB|1|A|U|176
7JQB|1|A|G|177
7JQB|1|A|C|178
7JQB|1|A|C|179
7JQB|1|A|G|180
7JQB|1|A|A|181
7JQB|1|A|C|182

Current chains

Chain A

rRNA

Nearby chains

Chain H

eS6