IL_7JQB_044
3D structure
- PDB id
- 7JQB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGC*GAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7JQB_044 not in the Motif Atlas
- Geometric match to IL_5J7L_061
- Geometric discrepancy: 0.1415
- The information below is about IL_5J7L_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7JQB|1|A|C|877
7JQB|1|A|G|878
7JQB|1|A|C|879
*
7JQB|1|A|G|907
7JQB|1|A|A|908
7JQB|1|A|G|909
Current chains
- Chain A
- rRNA
Nearby chains
No other chains within 10ÅColoring options: