IL_7JQB_065

3D structure

PDB id

7JQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQB|1|A|A|1287
7JQB|1|A|U|1288
7JQB|1|A|U|1289
7JQB|1|A|G|1290
*
7JQB|1|A|C|1309
7JQB|1|A|U|1310
7JQB|1|A|C|1311
7JQB|1|A|G|1312
7JQB|1|A|A|1313
7JQB|1|A|U|1314

Current chains

Chain A

rRNA

Nearby chains

Chain L

S10_plectin domain-containing protein

Chain N

eS12

Chain g

eS31