IL_7JQB_073

3D structure

PDB id

7JQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAUGC*GAGG

Length

9 nucleotides

Bulged bases

7JQB|1|A|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQB|1|A|C|1395
7JQB|1|A|A|1396
7JQB|1|A|U|1397
7JQB|1|A|G|1398
7JQB|1|A|C|1399
*
7JQB|1|A|G|1447
7JQB|1|A|A|1448
7JQB|1|A|G|1449
7JQB|1|A|G|1450

Current chains

Chain A

rRNA

Nearby chains

Chain R

Uncharacterized protein

Chain S

eS17

Chain V

uS10

Chain h

RACK1